BayesTME
==================================

A unified statistical framework for spatial transcriptomics.

This package implements BayesTME, a fully Bayesian method for analyzing ST data without needing single-cell RNA-seq (scRNA) reference data.

Contents
=========

.. toctree::
    :maxdepth: 2

    install
    overview
    data_format
    demo_notebooks
    command_line_interface
    example_workflow
    api
    fine_mapping_workflow

    🚀 Github <https://github.com/tansey-lab/bayestme>


Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`